/* * Copyright (C) 2011-2013 Karlsruhe Institute of Technology * * This file is part of Ufo. * * This library is free software: you can redistribute it and/or * modify it under the terms of the GNU Lesser General Public * License as published by the Free Software Foundation, either * version 3 of the License, or (at your option) any later version. * * This library is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * Lesser General Public License for more details. * * You should have received a copy of the GNU Lesser General Public * License along with this library. If not, see . */ #include "config.h" #ifdef __APPLE__ #include #else #include #endif #include #include "ufo-flat-field-correct-task.h" struct _UfoFlatFieldCorrectTaskPrivate { gboolean fix_nan_and_inf; gboolean absorptivity; gboolean sinogram_input; gfloat dark_scale; gfloat flat_scale; cl_kernel kernel; }; static void ufo_task_interface_init (UfoTaskIface *iface); G_DEFINE_TYPE_WITH_CODE (UfoFlatFieldCorrectTask, ufo_flat_field_correct_task, UFO_TYPE_TASK_NODE, G_IMPLEMENT_INTERFACE (UFO_TYPE_TASK, ufo_task_interface_init)) #define UFO_FLAT_FIELD_CORRECT_TASK_GET_PRIVATE(obj) (G_TYPE_INSTANCE_GET_PRIVATE((obj), UFO_TYPE_FLAT_FIELD_CORRECT_TASK, UfoFlatFieldCorrectTaskPrivate)) enum { PROP_0, PROP_FIX_NAN_AND_INF, PROP_ABSORPTIVITY, PROP_SINOGRAM_INPUT, PROP_DARK_SCALE, PROP_FLAT_SCALE, N_PROPERTIES }; static GParamSpec *properties[N_PROPERTIES] = { NULL, }; UfoNode * ufo_flat_field_correct_task_new (void) { return UFO_NODE (g_object_new (UFO_TYPE_FLAT_FIELD_CORRECT_TASK, NULL)); } static void ufo_flat_field_correct_task_setup (UfoTask *task, UfoResources *resources, GError **error) { UfoFlatFieldCorrectTaskPrivate *priv; priv = UFO_FLAT_FIELD_CORRECT_TASK_GET_PRIVATE (task); priv->kernel = ufo_resources_get_kernel (resources, "ffc.cl", "flat_correct", NULL, error); if (priv->kernel) UFO_RESOURCES_CHECK_SET_AND_RETURN (clRetainKernel (priv->kernel), error); } static void ufo_flat_field_correct_task_get_requisition (UfoTask *task, UfoBuffer **inputs, UfoRequisition *requisition, GError **error) { ufo_buffer_get_requisition (inputs[0], requisition); if (ufo_buffer_cmp_dimensions (inputs[1], requisition) != 0 || ufo_buffer_cmp_dimensions (inputs[2], requisition) != 0) { g_set_error_literal (error, UFO_TASK_ERROR, UFO_TASK_ERROR_GET_REQUISITION, "flat-field-correct inputs must have the same size"); } } static guint ufo_flat_field_correct_task_get_num_inputs (UfoTask *task) { return 3; } static guint ufo_flat_field_correct_task_get_num_dimensions (UfoTask *task, guint input) { UfoFlatFieldCorrectTaskPrivate *priv; priv = UFO_FLAT_FIELD_CORRECT_TASK_GET_PRIVATE (task); g_return_val_if_fail (input <= 2, 0); /* A sinogram */ if (input == 0) return 2; /* A row of dark frame depend on the sinogram_input flag */ return priv->sinogram_input ? 1 : 2; } static UfoTaskMode ufo_flat_field_correct_task_get_mode (UfoTask *task) { return UFO_TASK_MODE_PROCESSOR | UFO_TASK_MODE_GPU; } static gboolean ufo_flat_field_correct_task_process (UfoTask *task, UfoBuffer **inputs, UfoBuffer *output, UfoRequisition *requisition) { UfoFlatFieldCorrectTaskPrivate *priv; UfoProfiler *profiler; UfoGpuNode *node; cl_command_queue cmd_queue; cl_mem proj_mem; cl_mem dark_mem; cl_mem flat_mem; cl_mem out_mem; gint absorptivity, sino_in, fix_nan_and_inf; node = UFO_GPU_NODE (ufo_task_node_get_proc_node (UFO_TASK_NODE (task))); cmd_queue = ufo_gpu_node_get_cmd_queue (node); proj_mem = ufo_buffer_get_device_array (inputs[0], cmd_queue); dark_mem = ufo_buffer_get_device_array (inputs[1], cmd_queue); flat_mem = ufo_buffer_get_device_array (inputs[2], cmd_queue); out_mem = ufo_buffer_get_device_array (output, cmd_queue); priv = UFO_FLAT_FIELD_CORRECT_TASK_GET_PRIVATE (task); absorptivity = (gint) priv->absorptivity; sino_in = (gint) priv->sinogram_input; fix_nan_and_inf = (gint) priv->fix_nan_and_inf; UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->kernel, 0, sizeof (cl_mem), &out_mem)); UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->kernel, 1, sizeof (cl_mem), &proj_mem)); UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->kernel, 2, sizeof (cl_mem), &dark_mem)); UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->kernel, 3, sizeof (cl_mem), &flat_mem)); UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->kernel, 4, sizeof (cl_int), &sino_in)); UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->kernel, 5, sizeof (cl_int), &absorptivity)); UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->kernel, 6, sizeof (cl_int), &fix_nan_and_inf)); UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->kernel, 7, sizeof (cl_float), &priv->dark_scale)); UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->kernel, 8, sizeof (cl_float), &priv->flat_scale)); profiler = ufo_task_node_get_profiler (UFO_TASK_NODE (task)); ufo_profiler_call (profiler, cmd_queue, priv->kernel, 2, requisition->dims, NULL); return TRUE; } static void ufo_flat_field_correct_task_set_property (GObject *object, guint property_id, const GValue *value, GParamSpec *pspec) { UfoFlatFieldCorrectTaskPrivate *priv = UFO_FLAT_FIELD_CORRECT_TASK_GET_PRIVATE (object); switch (property_id) { case PROP_FIX_NAN_AND_INF: priv->fix_nan_and_inf = g_value_get_boolean (value); break; case PROP_ABSORPTIVITY: priv->absorptivity = g_value_get_boolean (value); break; case PROP_SINOGRAM_INPUT: priv->sinogram_input = g_value_get_boolean (value); break; case PROP_DARK_SCALE: priv->dark_scale = g_value_get_float (value); break; case PROP_FLAT_SCALE: priv->flat_scale = g_value_get_float (value); break; default: G_OBJECT_WARN_INVALID_PROPERTY_ID (object, property_id, pspec); break; } } static void ufo_flat_field_correct_task_get_property (GObject *object, guint property_id, GValue *value, GParamSpec *pspec) { UfoFlatFieldCorrectTaskPrivate *priv = UFO_FLAT_FIELD_CORRECT_TASK_GET_PRIVATE (object); switch (property_id) { case PROP_FIX_NAN_AND_INF: g_value_set_boolean (value, priv->fix_nan_and_inf); break; case PROP_ABSORPTIVITY: g_value_set_boolean (value, priv->absorptivity); break; case PROP_SINOGRAM_INPUT: g_value_set_boolean (value, priv->sinogram_input); break; case PROP_DARK_SCALE: g_value_set_float (value, priv->dark_scale); break; case PROP_FLAT_SCALE: g_value_set_float (value, priv->flat_scale); break; default: G_OBJECT_WARN_INVALID_PROPERTY_ID (object, property_id, pspec); break; } } static void ufo_flat_field_correct_task_finalize (GObject *object) { UfoFlatFieldCorrectTaskPrivate *priv; priv = UFO_FLAT_FIELD_CORRECT_TASK_GET_PRIVATE (object); if (priv->kernel) { UFO_RESOURCES_CHECK_CLERR (clReleaseKernel (priv->kernel)); priv->kernel = NULL; } G_OBJECT_CLASS (ufo_flat_field_correct_task_parent_class)->finalize (object); } static void ufo_task_interface_init (UfoTaskIface *iface) { iface->setup = ufo_flat_field_correct_task_setup; iface->get_num_inputs = ufo_flat_field_correct_task_get_num_inputs; iface->get_num_dimensions = ufo_flat_field_correct_task_get_num_dimensions; iface->get_mode = ufo_flat_field_correct_task_get_mode; iface->get_requisition = ufo_flat_field_correct_task_get_requisition; iface->process = ufo_flat_field_correct_task_process; } static void ufo_flat_field_correct_task_class_init (UfoFlatFieldCorrectTaskClass *klass) { GObjectClass *gobject_class = G_OBJECT_CLASS (klass); gobject_class->set_property = ufo_flat_field_correct_task_set_property; gobject_class->get_property = ufo_flat_field_correct_task_get_property; gobject_class->finalize = ufo_flat_field_correct_task_finalize; properties[PROP_FIX_NAN_AND_INF] = g_param_spec_boolean("fix-nan-and-inf", "Replace NAN and INF values with 0.0", "Replace NAN and INF values with 0.0", FALSE, G_PARAM_READWRITE); properties[PROP_ABSORPTIVITY] = g_param_spec_boolean ("absorption-correct", "Absorption correct", "Absorption correct", FALSE, G_PARAM_READWRITE); properties[PROP_SINOGRAM_INPUT] = g_param_spec_boolean ("sinogram-input", "If sinogram-input is True we correct only one line (the sinogram), thus darks are flats are 1D", "If sinogram-input is True we correct only one line (the sinogram), thus darks are flats are 1D", FALSE, G_PARAM_READWRITE); properties[PROP_DARK_SCALE] = g_param_spec_float ("dark-scale", "Scale the dark field prior to the flat field correct", "Scale the dark field prior to the flat field correct", -G_MAXFLOAT, G_MAXFLOAT, 1.0f, G_PARAM_READWRITE); properties[PROP_FLAT_SCALE] = g_param_spec_float ("flat-scale", "Scale the flat field prior to the flat field correct", "Scale the flat field prior to the flat field correct", -G_MAXFLOAT, G_MAXFLOAT, 1.0f, G_PARAM_READWRITE); for (guint i = PROP_0 + 1; i < N_PROPERTIES; i++) g_object_class_install_property (gobject_class, i, properties[i]); g_type_class_add_private (gobject_class, sizeof(UfoFlatFieldCorrectTaskPrivate)); } static void ufo_flat_field_correct_task_init(UfoFlatFieldCorrectTask *self) { self->priv = UFO_FLAT_FIELD_CORRECT_TASK_GET_PRIVATE(self); self->priv->fix_nan_and_inf = FALSE; self->priv->absorptivity = FALSE; self->priv->sinogram_input = FALSE; self->priv->kernel = NULL; self->priv->dark_scale = 1.0f; self->priv->flat_scale = 1.0f; }