summaryrefslogtreecommitdiffstats
path: root/src/ufo-dfi-sinc-task.c
blob: a48ac4e321ea2cc507c471c93c08641309e8b5aa (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
/*
 * Copyright (C) 2011-2013 Karlsruhe Institute of Technology
 *
 * This file is part of Ufo.
 *
 * This library is free software: you can redistribute it and/or
 * modify it under the terms of the GNU Lesser General Public
 * License as published by the Free Software Foundation, either
 * version 3 of the License, or (at your option) any later version.
 *
 * This library is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
 * Lesser General Public License for more details.
 *
 * You should have received a copy of the GNU Lesser General Public
 * License along with this library.  If not, see <http://www.gnu.org/licenses/>.
 */
#include "config.h"

#ifdef __APPLE__
#include <OpenCL/cl.h>
#else
#include <CL/cl.h>
#endif

#include <stdio.h>
#include <string.h>
#include <math.h>

#include "ufo-dfi-sinc-task.h"

#define BLOCK_SIZE 16

/**
 * SECTION:ufo-dfi-sinc-task
 * @Short_description: Compute the 2D Fourier spectrum of reconstructed image
 * using 1D Fourier projection of sinogram and sinc interpolation
 * @Title: dfi-sinc
 *
 * Computes the 2D Fourier spectrum of reconstructed image using
 * 1D Fourier prijection of sinogram (fft filter should be applied before).
 * There are no default values for properties, therefore they should be
 * assign manually. The property #UfoDfiSincTask:kernel-size is the length
 * of kernel which will be used in interpolation, #UfoDfiSincTask:number-presampled-values
 * is the number of presampled values which will be used to calculate
 * #UfoDfiSincTask:kernel-size kernel coefficients, #UfoDfiSincTask:roi-size - is the
 * length of one side of Region of Interest.
 *
 */

struct _UfoDfiSincTaskPrivate {
    UfoResources *resources;
    cl_kernel dfi_sinc_kernel;
    cl_kernel clear_kernel;

    UfoBuffer *ktbl_buffer;

    gdouble angle_step;
    guint number_presampled_values;
    guint L;
    gint roi_size;

    cl_mem in_tex;
};

static void ufo_task_interface_init (UfoTaskIface *iface);

G_DEFINE_TYPE_WITH_CODE (UfoDfiSincTask, ufo_dfi_sinc_task, UFO_TYPE_TASK_NODE,
                         G_IMPLEMENT_INTERFACE (UFO_TYPE_TASK,
                                                ufo_task_interface_init))

#define UFO_DFI_SINC_TASK_GET_PRIVATE(obj) (G_TYPE_INSTANCE_GET_PRIVATE((obj), UFO_TYPE_DFI_SINC_TASK, UfoDfiSincTaskPrivate))

enum {
    PROP_0,
    PROP_L,
    PROP_NUM_PRESAMPLED_VLS,
    PROP_ROI_SIZE,
    PROP_ANGLE_STEP,
    N_PROPERTIES
};

static GParamSpec *properties[N_PROPERTIES] = { NULL, };

UfoNode *
ufo_dfi_sinc_task_new (void)
{
    return UFO_NODE (g_object_new (UFO_TYPE_DFI_SINC_TASK, NULL));
}

/**
 * ufo_dfi_sinc_task_hammingw:
 * @i:  the number of current element in the array
 * @length:  the length of array
 *
 * http://en.wikipedia.org/wiki/Hamming_window#Hamming_window
 *
 * Returns: a float.
 */
static gfloat
ufo_dfi_sinc_task_hammingw(int i, int length)
{
    return (gfloat) (0.54f - 0.46f * cos (2*G_PI*((gfloat) i / (gfloat) length)));
}

/**
 * ufo_dfi_sinc_task_sinc:
 * @i:  the current number of sample of sinc function
 *
 * Returns: a float.
 */
static gfloat
ufo_dfi_sinc_task_sinc(gfloat x)
{
  return (x == 0.0f) ? 1.0f : (gfloat) (sin (G_PI * x) / (G_PI * x));
}

/**
 * ufo_dfi_sinc_task_get_ktbl:
 * @length:  the length of arrayo of presampled kernel values
 *
 * Returns: an array.
 */
static gfloat *
ufo_dfi_sinc_task_get_ktbl (size_t length)
{
    gfloat *ktbl = (gfloat *) g_malloc0 (length * sizeof (gfloat));

    size_t ktbl_len2 = (length - 1) / 2;
    gfloat step = (gfloat) G_PI / (gfloat) ktbl_len2;
    gfloat value = -(gfloat) ktbl_len2 * step;

    for (size_t i = 0; i < length; ++i, value += step) {
        ktbl[i] = ufo_dfi_sinc_task_sinc ((gfloat)value) * ufo_dfi_sinc_task_hammingw ((gint) i, (int) length);
    }

    return ktbl;
}

static void
ufo_dfi_sinc_task_setup (UfoTask *task,
                       UfoResources *resources,
                       GError **error)
{
    UfoDfiSincTaskPrivate *priv;
    cl_context context;
    cl_command_queue cmd_queue;

    priv = UFO_DFI_SINC_TASK_GET_PRIVATE (task);
    context = ufo_resources_get_context(resources);
    cmd_queue = g_list_nth_data(ufo_resources_get_cmd_queues(resources), 0);

    priv->resources = g_object_ref(resources);

    priv->dfi_sinc_kernel = ufo_resources_get_kernel (resources, "dfi.cl", "dfi_sinc_kernel", NULL, error);
    priv->clear_kernel = ufo_resources_get_kernel (resources, "dfi.cl", "clear_kernel", NULL, error);

    gfloat *tmp_ktbl = ufo_dfi_sinc_task_get_ktbl (priv->number_presampled_values);
    UfoRequisition ktbl_requisition;
    ktbl_requisition.n_dims = 2;
    ktbl_requisition.dims[0] = priv->number_presampled_values;
    ktbl_requisition.dims[1] = 1;

    priv->ktbl_buffer = ufo_buffer_new (&ktbl_requisition, context);
    gfloat *h_ktbl_buffer = ufo_buffer_get_host_array (priv->ktbl_buffer, cmd_queue);
    memcpy ((void *)h_ktbl_buffer, (const gpointer) tmp_ktbl, priv->number_presampled_values * sizeof (gfloat));
}

static void
ufo_dfi_sinc_task_get_requisition (UfoTask *task,
                                   UfoBuffer **inputs,
                                   UfoRequisition *requisition,
                                   GError **error)
{
    UfoRequisition input_requisition;
    ufo_buffer_get_requisition (inputs[0], &input_requisition);

    requisition->n_dims = 2;
    requisition->dims[0] = input_requisition.dims[0];
    requisition->dims[1] = input_requisition.dims[0] / 2;
}

static guint
ufo_dfi_sinc_task_get_num_inputs (UfoTask *task)
{
    return 1;
}

static guint
ufo_dfi_sinc_task_get_num_dimensions (UfoTask *task,
                                      guint input)
{
    g_return_val_if_fail (input == 0, 0);
    return 2;
}

static UfoTaskMode
ufo_dfi_sinc_task_get_mode (UfoTask *task)
{
    return UFO_TASK_MODE_PROCESSOR | UFO_TASK_MODE_GPU;
}

static gboolean
ufo_dfi_sinc_task_process (UfoTask *task,
                           UfoBuffer **inputs,
                           UfoBuffer *output,
                           UfoRequisition *requisition)
{
    UfoDfiSincTaskPrivate *priv;
    UfoGpuNode *node;
    UfoProfiler *profiler;
    UfoRequisition input_requisition;
    cl_command_queue cmd_queue;
    cl_context context;
    cl_mem in_mem, out_mem, ktbl_mem;
    cl_float angle_step_rad;
    cl_float L2;
    cl_int ktbl_len_2;
    cl_int raster_size;
    cl_float table_spacing;
    cl_float theta_max;
    cl_float rho_max;

    priv = UFO_DFI_SINC_TASK_GET_PRIVATE (task);
    node = UFO_GPU_NODE (ufo_task_node_get_proc_node (UFO_TASK_NODE (task)));
    cmd_queue = ufo_gpu_node_get_cmd_queue (node);
    context = ufo_resources_get_context(priv->resources);

    in_mem = ufo_buffer_get_device_array (inputs[0], cmd_queue);
    out_mem = ufo_buffer_get_device_array (output, cmd_queue);
    ktbl_mem = ufo_buffer_get_device_image (priv->ktbl_buffer, cmd_queue);

    ufo_buffer_get_requisition (inputs[0], &input_requisition);

    L2 = ((cl_float) priv->L) / 2.0f;
    ktbl_len_2 = (cl_int)(priv->number_presampled_values - 1) / 2;
    raster_size = (cl_int)input_requisition.dims[0] / 2;
    table_spacing = ((cl_float) priv->number_presampled_values) / ((cl_float) priv->L);
    theta_max = (cl_float) input_requisition.dims[1];
    rho_max = (cl_float) input_requisition.dims[0] / 2;
    angle_step_rad = priv->angle_step < 0.0 ? G_PI / input_requisition.dims[1] : priv->angle_step;

    int interp_grid_cols = (int) ceil ((float) raster_size / (float) BLOCK_SIZE);

    if (priv->roi_size >= 1 && priv->roi_size <= raster_size) {
        interp_grid_cols = (int) ceil ((float) priv->roi_size / (float) BLOCK_SIZE);
    }

	int interp_grid_rows = (int) ceil ((float) ((raster_size/2)+1) / (float)BLOCK_SIZE);

	if (priv->roi_size >= 1 && priv->roi_size <= raster_size) {
		interp_grid_rows = (int) ceil ((float) priv->roi_size/2.0 / (float)BLOCK_SIZE);
	}

    gint spectrum_offset = (raster_size - (interp_grid_cols * BLOCK_SIZE)) / 2;
    gfloat max_radius = (gfloat) (interp_grid_cols * BLOCK_SIZE) / 2.0f;

    /* Setup texture */
    if (priv->in_tex == NULL) {
        cl_image_format format;
        cl_mem_flags flags;
        cl_int err;
        gsize width, height;

        format.image_channel_order = CL_RG;
        format.image_channel_data_type = CL_FLOAT;

        flags = CL_MEM_READ_WRITE;
        width = input_requisition.dims[0] / 2;
        height = input_requisition.dims[1];

        priv->in_tex = clCreateImage2D (context, flags, &format, width, height, 0, NULL, &err);
        UFO_RESOURCES_CHECK_CLERR (err);
    }

    size_t zero_offset[] = {0, 0, 0};
    size_t projection_region[] = {input_requisition.dims[0]/2, input_requisition.dims[1], 1};

    clEnqueueCopyBufferToImage(cmd_queue, in_mem, priv->in_tex, 0, zero_offset, projection_region, 0, NULL, NULL);

    /* Set size of working group */
    size_t local_work_size[] = {BLOCK_SIZE, BLOCK_SIZE};

    /* Execution of cleaning kernel */
    size_t empty_kernel_working_size[] = {(size_t)raster_size, (size_t)raster_size};

    UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->clear_kernel, 0, sizeof (cl_mem), &out_mem));
    UFO_RESOURCES_CHECK_CLERR (clEnqueueNDRangeKernel (cmd_queue,
                                            priv->clear_kernel,
                                            requisition->n_dims,
                                            NULL,
                                            empty_kernel_working_size,
                                            local_work_size,
                                            0, NULL, NULL));

    /* Execution of DFI kernel */
    size_t working_size[] = {(size_t)(interp_grid_cols * BLOCK_SIZE),
                             (size_t)(interp_grid_rows * BLOCK_SIZE)};

    UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->dfi_sinc_kernel, 0, sizeof (cl_mem), &priv->in_tex));
    UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->dfi_sinc_kernel, 1, sizeof (cl_mem), &ktbl_mem));
    UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->dfi_sinc_kernel, 2, sizeof (cl_float), &L2));
    UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->dfi_sinc_kernel, 3, sizeof (cl_int), &ktbl_len_2));
    UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->dfi_sinc_kernel, 4, sizeof (cl_int), &raster_size));
    UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->dfi_sinc_kernel, 5, sizeof (cl_float), &table_spacing));
    UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->dfi_sinc_kernel, 6, sizeof (cl_float), &angle_step_rad));
    UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->dfi_sinc_kernel, 7, sizeof (cl_float), &theta_max));
    UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->dfi_sinc_kernel, 8, sizeof (cl_float), &rho_max));
    UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->dfi_sinc_kernel, 9, sizeof (cl_float), &max_radius));
    UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->dfi_sinc_kernel, 10, sizeof (cl_int), &spectrum_offset));
    UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->dfi_sinc_kernel, 11, sizeof (cl_mem), &out_mem));

    profiler = ufo_task_node_get_profiler (UFO_TASK_NODE (task));
    ufo_profiler_call (profiler, cmd_queue, priv->dfi_sinc_kernel, requisition->n_dims, working_size, local_work_size);

    return TRUE;
}

static void
ufo_dfi_sinc_task_set_property (GObject *object,
                                guint property_id,
                                const GValue *value,
                                GParamSpec *pspec)
{
    UfoDfiSincTaskPrivate *priv = UFO_DFI_SINC_TASK_GET_PRIVATE (object);

    switch (property_id) {
        case PROP_L:
            priv->L = g_value_get_uint (value);
            break;
        case PROP_NUM_PRESAMPLED_VLS:
            {
                guint v;

                v = g_value_get_uint (value);

                if (v % 2 == 0)
                    g_warning ("::number-presampled-values cannot be even");
                else
                    priv->number_presampled_values = v;
            }
            break;
        case PROP_ROI_SIZE:
            priv->roi_size = g_value_get_int (value);
            break;
        case PROP_ANGLE_STEP:
            priv->angle_step = g_value_get_double (value);
            break;
        default:
            G_OBJECT_WARN_INVALID_PROPERTY_ID (object, property_id, pspec);
            break;
    }
}

static void
ufo_dfi_sinc_task_get_property (GObject *object,
                                guint property_id,
                                GValue *value,
                                GParamSpec *pspec)
{
    UfoDfiSincTaskPrivate *priv = UFO_DFI_SINC_TASK_GET_PRIVATE (object);

    switch (property_id) {
        case PROP_L:
            g_value_set_uint (value, priv->L);
            break;
        case PROP_NUM_PRESAMPLED_VLS:
            g_value_set_uint (value, priv->number_presampled_values);
            break;
        case PROP_ROI_SIZE:
            g_value_set_int (value, priv->roi_size);
            break;
        case PROP_ANGLE_STEP:
            g_value_set_double (value, priv->angle_step);
            break;
        default:
            G_OBJECT_WARN_INVALID_PROPERTY_ID (object, property_id, pspec);
            break;
    }
}

static void
ufo_dfi_sinc_task_finalize (GObject *object)
{
    UfoDfiSincTaskPrivate *priv = UFO_DFI_SINC_TASK_GET_PRIVATE (object);

    if (priv->in_tex) UFO_RESOURCES_CHECK_CLERR(clReleaseMemObject (priv->in_tex));

    G_OBJECT_CLASS (ufo_dfi_sinc_task_parent_class)->finalize (object);
}

static void
ufo_dfi_sinc_task_dispose (GObject *object)
{
    UfoDfiSincTaskPrivate *priv = UFO_DFI_SINC_TASK_GET_PRIVATE (object);

    if (priv->resources != NULL) {
        g_object_unref (priv->resources);
        priv->resources = NULL;
    }

    if (priv->ktbl_buffer != NULL) {
        g_object_unref (priv->ktbl_buffer);
        priv->ktbl_buffer = NULL;
    }

    G_OBJECT_CLASS (ufo_dfi_sinc_task_parent_class)->dispose (object);
}

static void
ufo_task_interface_init (UfoTaskIface *iface)
{
    iface->setup = ufo_dfi_sinc_task_setup;
    iface->get_num_inputs = ufo_dfi_sinc_task_get_num_inputs;
    iface->get_num_dimensions = ufo_dfi_sinc_task_get_num_dimensions;
    iface->get_mode = ufo_dfi_sinc_task_get_mode;
    iface->get_requisition = ufo_dfi_sinc_task_get_requisition;
    iface->process = ufo_dfi_sinc_task_process;
}

static void
ufo_dfi_sinc_task_class_init (UfoDfiSincTaskClass *klass)
{
    GObjectClass *gobject_class = G_OBJECT_CLASS (klass);
    const gfloat limit = (gfloat) (4.0 * G_PI);

    gobject_class->set_property = ufo_dfi_sinc_task_set_property;
    gobject_class->get_property = ufo_dfi_sinc_task_get_property;
    gobject_class->finalize = ufo_dfi_sinc_task_finalize;
    gobject_class->dispose = ufo_dfi_sinc_task_dispose;

    properties[PROP_L] =
        g_param_spec_uint ("kernel-size",
            "Kernel size",
            "The length of kernel which will be used in interpolation.",
            1, 25, 7,
            G_PARAM_READWRITE);

    properties[PROP_NUM_PRESAMPLED_VLS] =
        g_param_spec_uint ("number-presampled-values",
            "Number of presampled values",
            "Number of presampled values which will be used to calculate L kernel coefficients.",
            1, 16383, 2047,
            G_PARAM_READWRITE);

    properties[PROP_ROI_SIZE] =
        g_param_spec_int ("roi-size",
            "Size of Region of Interest",
            "The length of one side of Region of Interest.",
            -1, G_MAXINT, -1,
            G_PARAM_READWRITE);

    properties[PROP_ANGLE_STEP] =
        g_param_spec_double ("angle-step",
            "Increment of angle in radians",
            "Increment of angle in radians",
            -limit, +limit, 0.0,
            G_PARAM_READWRITE);

    for (guint i = PROP_0 + 1; i < N_PROPERTIES; i++)
        g_object_class_install_property (gobject_class, i, properties[i]);

    g_type_class_add_private (gobject_class, sizeof(UfoDfiSincTaskPrivate));
}

static void
ufo_dfi_sinc_task_init(UfoDfiSincTask *self)
{
    self->priv = UFO_DFI_SINC_TASK_GET_PRIVATE(self);
    self->priv->number_presampled_values = 2047;
    self->priv->L = 7;
    self->priv->roi_size = 0;
    self->priv->in_tex = NULL;
    self->priv->angle_step = -1.0;
}